# retroharmonize ![retroharmonize](reference/figures/logo20.png)[![Project Status: Active. The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active) [![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/retroharmonize)](https://cran.r-project.org/package=retroharmonize) [![CRAN_time_from_release](https://www.r-pkg.org/badges/ago/retroharmonize)](https://cran.r-project.org/package=retroharmonize) [![metacran downloads](https://cranlogs.r-pkg.org/badges/retroharmonize)](https://cran.r-project.org/package=retroharmonize) [![Codecov](https://codecov.io/gh/dataobservatory-eu/retroharmonize/branch/main/graph/badge.svg)](https://app.codecov.io/gh/dataobservatory-eu/retroharmonize) [![R-CMD-check](https://github.com/dataobservatory-eu/retroharmonize/workflows/R-CMD-check/badge.svg)](https://github.com/dataobservatory-eu/retroharmonize/actions) The goal of `retroharmonize` is to facilitate retrospective (ex-post) harmonization of survey data in a reproducible manner. The package provides tools for organizing the metadata, standardizing the coding of variables, variable names and value labels, including missing values, and for documenting all transformations, with the help of comprehensive S3 classes. Currently being generalized from problems solved in the not yet released [eurobarometer](https://github.com/antaldaniel/eurobarometer) package ([doi](https://doi.org/10.5281/zenodo.3825700).) ## Installation The package is available on [CRAN](https://CRAN.R-project.org): ``` r install.packages("retroharmonize") ``` The development version can be installed from [GitHub](https://github.com/) with: ``` r # install.packages("devtools") devtools::install_github("rOpenGov/retroharmonize") ``` You can download the manual in PDF for the [0.2.4 release](https://retroharmonize.dataobservatory.eu/retroharmonize_0.2.4.pdf) but it is significantly different from 0.2.5. ## Survey harmonization Surveys, i.e., systematic primary observation and data collections are important data sources of both social and natural sciences. They are in most cases the primary data sources of scientific research. Drawing information from several surveys, conducted in different locations or in different time can greatly enhance the inferential capacity of the surveys, but it requires significant data processing and statistical processing work. Our R software package offers a practical and comprehensive solution to harmonizing the datasets and their codebooks. Statistical matching is a related concepts that can take a harmonized dataset further, for example, with creating new, statistically better, unified weights. For these problems, [StatMatch](https://CRAN.R-project.org/package=StatMatch) is a mature solution in R. Survey data harmonization refers to procedures that improve the data comparability or the inferential capacity of multiple surveys. The *retroharmonize* package support various data processing, documentation, file/type conversion aspects of various retrospective survey harmonization workflows (i.e. harmonization tasks related to surveys that already have already been conducted, recorded into a coded file.) From a technical perspective, the aim of the survey harmonization is to create a single, tidy, joined harmonized dataset in the form of a data frame that contains a row identifier, which is truly unique across all observations, and which also contains the concatenated and harmonized variables. We do this in a way that provides an unambiguous mapping of numerical coded and labelled data, including special and missing data. This way we avoid coercion that may lead to logical errors due to syntactically correct, but logically inconsistent variable labelling in across differently coded source files. Taking the harmonization to the level of type harmonization to *numeric* and *factor* classes allows the use of R’s powerful statistical packages that require numeric or factor type input, and a wide range of survey output harmonization (harmonized statistics and indicators. For an extended overview of these problems with illustrations please refer to the vignette [Survey Harmonization](https://retroharmonize.dataobservatory.eu/articles/survey_harmonization.html). ### 1. Importing Survey data, i.e., data derived from questionnaires or systematic data collection, such as inspecting objects in nature, recording prices at shops are usually stored databases, and converted to complex files retaining at least coding, labelling metadata together with the data. This must be imported to R so that the appropriate harmonization tasks can be carried out with the appropriate R types. ### 2. Harmonization of concepts After importing data with some descriptive metadata such as numerical coding and labelling, we need to create a map of the information that is in our R session to prepare a harmonization plan. We must find information related to sufficiently similar concepts that can be harmonized to be successfully joined into a single variable, and eventually a table of similar variables must be joined. We create a map of the measured concepts that needs to be harmonized, for example, a binary sex variable with missing cases and a four-level categorical variable on gender identification that has *other* and *declined* options. See the vignette [Working With Survey Metadata](https://retroharmonize.dataobservatory.eu/articles/survey_harmonization.html) how mapping the metadata of the surveys can help getting started with this first step. We use a [crosswalk table](https://retroharmonize.dataobservatory.eu/articles/crosswalk.html) or a *crosswalk scheme* for all the variable name, value label and type conversion tasks that we plan to do. ### 3. Harmonization of variable names Make sure that `survey_1$sex` and `survey_2$gender` can be concatenated to a gender vector or `survey_joined$gender`. See more in the [Working With A Crosswalk Table](https://retroharmonize.dataobservatory.eu/articles/crosswalk.html). ### 4. Harmonization of variable numerical codes and labels For example, *Female=0* in `survey_1$sex` and *female=2* in `survey_2$gender` becomes consistently female=0. Missing and *declined* values are consistently handled. ### 5. Consistent types To use R’s statistical functions with the concatenated version of `survey_1$sex` and `survey_2$gender` they must have the same R type. In the vast majority of the cases either *numeric* or *factor*, and in data visualization applications sometimes *character*. See more in the [Harmonize Value Labels](https://retroharmonize.dataobservatory.eu/articles/harmonize_labels.html) vignette. ### 6. Reproducibility & Documentation To review statistical results and model results derived from the concatenated variable (or the joined data frame), they must remain comparable with `survey_1$sex` and `survey_2$gender`. It is also necessary to have a new, unique row ID for each observation. If you want to make your work available outside R, in a different software, the joined, longitudional data frame must be exported in a consistent manner. ## Use Cases We also provide three extensive case studies illustrating how the `retroharmonize` package can be used for ex-post harmonization of data from cross-national surveys: - [Afrobarometer](https://retroharmonize.dataobservatory.eu/articles/afrobarometer.html) - [Arab Barometer](https://retroharmonize.dataobservatory.eu/articles/arabbarometer.html) - [Eurobarometer](https://retroharmonize.dataobservatory.eu/articles/eurobarometer.html) The creators of `retroharmonize` are not affiliated with either Afrobarometer, Arab Barometer, Eurobarometer, or the organizations that designs, produces or archives their surveys. We create a large, harmonized dataset for extensive testing of our packages capabilities. The replication data of this special use case can be found on - [Harmonized Cultural Access & Participation Dataset](https://retroharmonize.dataobservatory.eu/articles/cap.html) You can find this harmonized dataset on Zenodo in the [Digital Music Observatory](https://zenodo.org/communities/music_observatory/) and the [Cultural Creative Sectors Industries Data Observatory](https://zenodo.org/communities/ccsi/) repositories. [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5781672.svg)](https://doi.org/10.5281/zenodo.5781672) We are building experimental APIs data in the form of automated observatories, which are running retroharmonize regularly and improving known statistical data sources. See also the [Green Deal Data Observatory](https://greendeal.dataobservatory.eu/) and the [Economy Data Observatory](https://economy.dataobservatory.eu/). ## Working with SPSS files Survey data is often available in SPSS’s custom labelled format. Unfortunately, joining data with different labelling is not possible. When you do not need to preserve the history of complex harmonization problems, codebook, etc, then you do not necessary need to look under the hoods of our S3 classes. The new [`labelled_spss_survey()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) class is an inherited extension of [haven’s labelled_spss class](https://haven.tidyverse.org/reference/labelled_spss.html). It not only preserves variable and value labels and the user-defined missing range, but also gives an identifier, for example, the filename or the wave number, to the vector. Additionally, it enables the preservation— as metadata attributes—the original variable names, labels, and value codes and labels, from the source data. This way, the harmonized data also contain the pre-harmonization record. The vignette [Working With The labelled_spss_survey Class](https://retroharmonize.dataobservatory.eu/articles/labelled_spss_survey.html) provides more information about the [`labelled_spss_survey()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) class. In [Harmonize Value Labels](https://retroharmonize.dataobservatory.eu/articles/harmonize_labels.html) we discuss the characteristics of the [`labelled_spss_survey()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) class and demonstrates the problems that using this class solves. ## Citations and related work ### Citing the data sources Our package has been tested on three harmonized survey’s microdata. Because [retroharmonize](https://retroharmonize.dataobservatory.eu/) is not affiliated with any of these data sources, to replicate our tutorials or work with the data, you have download the data files from these sources, and you have to cite those sources in your work. **Afrobarometer** data: Cite [Afrobarometer](https://www.afrobarometer.org/data/) **Arab Barometer** data: cite [Arab Barometer](https://www.arabbarometer.org/survey-data/data-downloads/). **Eurobarometer** data: The [Eurobarometer](https://commission.europa.eu/resources/statistics/public-opinion-survey_en) data [Eurobarometer](https://commission.europa.eu/resources/statistics/public-opinion-survey_en) raw data and related documentation (questionnaires, codebooks, etc.) are made available by *GESIS*, *ICPSR* and through the *Social Science Data Archive* networks. You should cite your source, in our examples, we rely on the [GESIS](https://search.gesis.org/) data files. ### Citing the retroharmonize R package For main developer and contributors, see the [package](https://retroharmonize.dataobservatory.eu/) homepage. This work can be freely used, modified and distributed under the GPL-3 license: ``` r citation("retroharmonize") #> To cite package 'retroharmonize' in publications use: #> #> Antal D (2026). _retroharmonize: Ex Post Survey Data Harmonization_. #> R package version 0.2.6, #> . #> #> A BibTeX entry for LaTeX users is #> #> @Manual{, #> title = {retroharmonize: Ex Post Survey Data Harmonization}, #> author = {Daniel Antal}, #> year = {2026}, #> note = {R package version 0.2.6}, #> url = {https://retroharmonize.dataobservatory.eu/}, #> } ``` ### Contact For contact information, see the [package](https://retroharmonize.dataobservatory.eu/) homepage. ### Code of Conduct Please note that the `retroharmonize` project is released with a [Contributor Code of Conduct](https://www.contributor-covenant.org/version/2/0/code_of_conduct/). By contributing to this project, you agree to abide by its terms. # Package index ## Importing Survey data, i.e., data derived from questionnaires or systematic data collection, such as inspecting objects in nature, recording prices at shops are usually stored databases, and converted to complex files retaining at least coding, labelling metadata together with the data. This must be imported to R so that the appropriate harmonization tasks can be carried out with the appropriate R types. - [`read_surveys()`](https://retroharmonize.dataobservatory.eu/reference/read_surveys.md) [`read_survey()`](https://retroharmonize.dataobservatory.eu/reference/read_surveys.md) : Read survey files into memory or save as \`.rds\` - [`read_rds()`](https://retroharmonize.dataobservatory.eu/reference/read_rds.md) : Read a survey from an \`.rds\` file - [`read_spss()`](https://retroharmonize.dataobservatory.eu/reference/read_spss.md) : Read SPSS survey files - [`read_dta()`](https://retroharmonize.dataobservatory.eu/reference/read_dta.md) : Read a Stata \`.dta\` survey file - [`read_csv()`](https://retroharmonize.dataobservatory.eu/reference/read_csv.md) : Read a survey dataset from a CSV file - [`pull_survey()`](https://retroharmonize.dataobservatory.eu/reference/pull_survey.md) : Retrieve a survey from a survey list ## Harmonizing concepts with metadata After importing data with some **descriptive metadata** such as **numerical coding** and **labelling**, we need to create a map of the information that is in our R session to prepare a harmonization plan. We must find information related to sufficiently similar concepts that can be harmonized to be successfully joined into a single variable, and eventually a table of similar variables must be joined. - [`metadata_create()`](https://retroharmonize.dataobservatory.eu/reference/metadata_create.md) [`metadata_waves_create()`](https://retroharmonize.dataobservatory.eu/reference/metadata_create.md) : Create metadata tables from survey datasets - [`metadata_survey_create()`](https://retroharmonize.dataobservatory.eu/reference/metadata_survey_create.md) : Create variable-level metadata from a survey dataset - [`retroharmonize`](https://retroharmonize.dataobservatory.eu/reference/retroharmonize.md) : retroharmonize: Retrospective harmonization of survey data files ## Codebooks The new functions will follow the DDI and SDMX terminology. See vignette [Harmonizing Concepts, Questions, and Variables](https://retroharmonize.dataobservatory.eu/articles/concept.html) - [`create_codebook()`](https://retroharmonize.dataobservatory.eu/reference/create_codebook.md) [`codebook_waves_create()`](https://retroharmonize.dataobservatory.eu/reference/create_codebook.md) [`codebook_surveys_create()`](https://retroharmonize.dataobservatory.eu/reference/create_codebook.md) : Create a survey codebook ## Harmonize variable names Before joining variables containing responses about the same concept, make sure that they have **identical names** in the re-processed surveys. See the vignette [Working with a Crosswalk Table](https://retroharmonize.dataobservatory.eu/articles/crosswalk.html) for examples and further clarification. - [`harmonize_var_names()`](https://retroharmonize.dataobservatory.eu/reference/harmonize_var_names.md) : Harmonize the variable names of surveys - [`label_normalize()`](https://retroharmonize.dataobservatory.eu/reference/label_normalize.md) [`var_label_normalize()`](https://retroharmonize.dataobservatory.eu/reference/label_normalize.md) [`val_label_normalize()`](https://retroharmonize.dataobservatory.eu/reference/label_normalize.md) : Normalize value and variable labels - [`harmonize_survey_variables()`](https://retroharmonize.dataobservatory.eu/reference/harmonize_survey_variables.md) : Read a survey from a CSV file ## Harmonize numerical codes and labels To merge variables from different surveys into a single variable, you must make sure that the numerical codes and labels, for example *0=‘no’* and *1=‘yes’* are processed identically. See the vignette [Harmonize Value Labels](https://retroharmonize.dataobservatory.eu/articles/harmonize_labels.html) for examples and further clarification. - [`collect_val_labels()`](https://retroharmonize.dataobservatory.eu/reference/collect_val_labels.md) [`collect_na_labels()`](https://retroharmonize.dataobservatory.eu/reference/collect_val_labels.md) : Collect labels from metadata file - [`harmonize_values()`](https://retroharmonize.dataobservatory.eu/reference/harmonize_values.md) : Harmonize the values and labels of labelled vectors - [`harmonize_survey_values()`](https://retroharmonize.dataobservatory.eu/reference/harmonize_survey_values.md) [`harmonize_waves()`](https://retroharmonize.dataobservatory.eu/reference/harmonize_survey_values.md) : Harmonize values in surveys - [`merge_surveys()`](https://retroharmonize.dataobservatory.eu/reference/merge_surveys.md) : Merge and harmonize surveys - [`merge_waves()`](https://retroharmonize.dataobservatory.eu/reference/merge_waves.md) : Deprecated wrapper for \`merge_surveys()\` ## Harmonize missing and special cases Some variable codes have a special meaning, such as a various labels of **missing values** which need to be converted differently to numeric, factor or character representation. See the vignette [Harmonize Value Labels](https://retroharmonize.dataobservatory.eu/articles/harmonize_labels.html) for examples and further clarification. - [`collect_val_labels()`](https://retroharmonize.dataobservatory.eu/reference/collect_val_labels.md) [`collect_na_labels()`](https://retroharmonize.dataobservatory.eu/reference/collect_val_labels.md) : Collect labels from metadata file - [`na_range_to_values()`](https://retroharmonize.dataobservatory.eu/reference/na_range_to_values.md) : Harmonize SPSS-style missing value ranges - [`harmonize_na_values()`](https://retroharmonize.dataobservatory.eu/reference/harmonize_na_values.md) : Harmonize na_values in haven_labelled_spss ## Crosswalk Laying out the harmonization **crosswalk scheme** (unifying variable names, codes, labels.) See the vignette [Working with a Crosswalk Table](https://retroharmonize.dataobservatory.eu/articles/crosswalk.html) for examples and further clarification. - [`is.crosswalk_table()`](https://retroharmonize.dataobservatory.eu/reference/crosswalk_table_create.md) [`crosswalk_table_create()`](https://retroharmonize.dataobservatory.eu/reference/crosswalk_table_create.md) : Validate a crosswalk table - [`crosswalk_surveys()`](https://retroharmonize.dataobservatory.eu/reference/crosswalk_surveys.md) [`crosswalk()`](https://retroharmonize.dataobservatory.eu/reference/crosswalk_surveys.md) : Crosswalk and harmonize surveys ## Subsetting Remove variables that **cannot be harmonized** in your workflow either in memory (faster for smaller tasks) or sequentially from files. See the vignette [Working with a Crosswalk Table](https://retroharmonize.dataobservatory.eu/articles/crosswalk.html) for examples and further clarification. - [`subset_surveys()`](https://retroharmonize.dataobservatory.eu/reference/subset_surveys.md) [`subset_waves()`](https://retroharmonize.dataobservatory.eu/reference/subset_surveys.md) [`subset_save_surveys()`](https://retroharmonize.dataobservatory.eu/reference/subset_surveys.md) : Subset and optionally harmonize surveys ## Documentation functions These functionality requires a thorough review. - [`document_survey_item()`](https://retroharmonize.dataobservatory.eu/reference/document_survey_item.md) : Document survey item provenance - [`document_surveys()`](https://retroharmonize.dataobservatory.eu/reference/document_surveys.md) [`document_waves()`](https://retroharmonize.dataobservatory.eu/reference/document_surveys.md) : Document survey lists - [`create_codebook()`](https://retroharmonize.dataobservatory.eu/reference/create_codebook.md) [`codebook_waves_create()`](https://retroharmonize.dataobservatory.eu/reference/create_codebook.md) [`codebook_surveys_create()`](https://retroharmonize.dataobservatory.eu/reference/create_codebook.md) : Create a survey codebook ## Type conversion Consistently treat labels, missing value ranges, missing value labels imported from SPSS, STATA or other source to use R language statistical functions, which mainly work with the base class of **numeric** or **factor**. For data visualization, the base class **character** may be preferred. See vignette [The labelled_spss_survey class](https://retroharmonize.dataobservatory.eu/articles/labelled_spss_survey.html) for further information. - [`survey()`](https://retroharmonize.dataobservatory.eu/reference/survey.md) [`is.survey()`](https://retroharmonize.dataobservatory.eu/reference/survey.md) [`summary(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/survey.md) : Create a survey data frame - [`is.survey_df()`](https://retroharmonize.dataobservatory.eu/reference/survey_df.md) [`survey_df()`](https://retroharmonize.dataobservatory.eu/reference/survey_df.md) [`print(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/survey_df.md) : Create a survey object - [`labelled_spss_survey()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`` `[`( ``*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`print(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`summary(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`is.na(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`levels(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`` `names<-`( ``*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`format(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`is.labelled_spss_survey()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`median(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`quantile(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`weighted.mean(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`mean(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) [`sum(`*``*`)`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey.md) : Labelled SPSS-style vectors with survey provenance - [`as_labelled_spss_survey()`](https://retroharmonize.dataobservatory.eu/reference/as_labelled_spss_survey.md) : Labelled to labelled_spss_survey - [`concatenate()`](https://retroharmonize.dataobservatory.eu/reference/concatenate.md) : Concatenate haven_labelled_spss vectors - [`as_numeric()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey_coercion.md) [`as_character()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey_coercion.md) [`as_factor()`](https://retroharmonize.dataobservatory.eu/reference/labelled_spss_survey_coercion.md) : Coercion methods for labelled survey vectors # Articles ### Conceptual We try to bulid a correspondance with the DDI and SDMX standards, the exiting literature and our own practice. - [Harmonizing Concepts, Questions, and Variables](https://retroharmonize.dataobservatory.eu/articles/concept.md): - [Value Labels and Codelists](https://retroharmonize.dataobservatory.eu/articles/codelist.md): - [Working with a Crosswalk Table](https://retroharmonize.dataobservatory.eu/articles/crosswalk.md): - [Harmonize Value Labels](https://retroharmonize.dataobservatory.eu/articles/harmonize_labels.md): ### Tutorials An overview of the harmonization workflow and support for **mapping concepts**, creating a **crosswalk scheme** of the harmonization, carrying out variable name, numerical code, labeling and type setting harmonization. - [Survey Harmonization](https://retroharmonize.dataobservatory.eu/articles/survey_harmonization.md): - [Working With Survey Metadata](https://retroharmonize.dataobservatory.eu/articles/metadata.md): - [documentation](https://retroharmonize.dataobservatory.eu/articles/documentation.md): - [Getting Started](https://retroharmonize.dataobservatory.eu/articles/retroharmonize.md): ### Use cases Real-life examples with thee major harmonized survey program’s data. - [Case Study: Working With Afrobarometer surveys](https://retroharmonize.dataobservatory.eu/articles/afrobarometer.md): ### Under the hood The s3 class inheritted from *labelled* and *haven* - [The labelled_spss_survey class](https://retroharmonize.dataobservatory.eu/articles/labelled_spss_survey.md):